Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015903466.1_cds_XP_016453540.1_47657
CDS Infomation

[gene=LOC107777890] [db_xref=GeneID:107777890] [protein=protein NRT1/ PTR FAMILY 5.2-like] [protein_id=XP_016453540.1] [location=complement(join(60771..61668,62636..63201,66332..66549,69235..69364))] [gbkey=CDS]
Sequence

ATGGCAGCTTGTCAAGTGGATGAAAATGGATATGATGATGGATATACAAAAGATGGAACA
GTGGATCTCAAAGGCAATCCTGTTCTTCGATCCAAGAGAGGTGGATGGAAAGCTTGTTCC
TTCATTGTTGTTTATGAAGTGTTCGAACGTATGGCATATTATGGAATATCATCAAACTTG
GTAATATACTTAACTGAGAAACTGCACCAAGGCACAGTGAAATCTTCAAACAATGTGACA
AATTGGGTGGGCACAATTTGGATGACCCCTATCTTGGGCGCCTACTTTGCTGACGCTTTT
CTTGGACGTTATTGGACTTTCTTGATTGCCTCTGCTATTTATCTCTTGGGTATGTCTCTA
CTAACACTAGCTGTATCAATCCATGGCCTAAAGCCTCCTCCTTGTGCCAGTCCAACTGCA
GCTAACTGCAAGAAAGCATCCACACTTCAACTAGCTGTGTTTTTTGGTGCACTCTACACC
TTAGCCGTCGGCACCGGCGGCACGAAGCCCAATATATCGACAATCGGCGCCGATCAATTC
GACGAGTTTCATCCAAAAGAAAAATCTCAAAAACTTTCATTTTTCAATTGGTGGATGTTT
AGTATTTTCTTGGGAACTCTCTTTGCTAACACTGTGCTTGTGTATATTCAAGACAATGTG
GGCTGGACTCTTGGGTATGGGCTTCCAACAGTGGGCCTTGGTATATCAATAATGATATTT
TTGGCTGGATCATCTTTTTATAGGCATAAAAAGCCCAGAGGAAGCCCATTTACAAGAATG
GCTAAGGTCATTATAGCTGCCTTAAGGAAATGGAAAGTTACAGTCCCTACTGATCCAAAA
GAGTTGTATGAGCTTGATTTGGGAGAATATACCAAAAATGGAAAAGTCAGAATTGACTCC
ACACCTACATTGAGGTTTCTGAATAAAGCTTGTGTGAAAACAGATACAAATGATCCATGG
ATGTTATGTTCAGTAACTCAAGTGGAAGAAACTAAGCAAATGCTAAGGATGATACCAATC
TTGATAGCTACATTCATTCCAAGCACAATGATAGCTCAAATCAACACACTTTTTGTCAAA
CAAGGCACAACCCTAAAGAGAAACATTGGTAATTTCAGTATCCCTCCAGCTAGTTTAGGT
GCATTCGTTACCATATCGTTGCTAGTCTCCGTTGTGCTCTACGATCGTTTCTTCATGAAA
ATCGCCAAAAGACTGACGAAAAATCCAAGAGGTATAAATATACTTCAAAGAATGGGAATT
GGAATGGCATTCCATATTCTGATCATGTTAGTAGCATCGTTCGTCGAAAGGCATAGACTT
AGTGTAGCTAAGGATAATGGCCTAGTTGAAAATGGTAAACAAGTACCATTATCTATATTG
ATTTTGCTACCTCAGTTTATTCTTATGGGAACAGCTGATGCATTTTTGGAAGTAGCTAAG
ATTGAGTTCTTTTATGATCAAGCACCAGAAGGAATGAAGAGTTTAGGAACTTCTTATTCT
ATGACAAGTCTTGGAGTTGGGAATTTCATTAGTAGTTTCTTGCTTTCAACAGTTTCTGAT
ATTACTAAAAAGCATGGGAATCACAGAGGATGGATCTTAAACAACTTGAATGCATCTCAT
CTTGACTATTACTATGCGTTATTCGCGGTACTTAACTTATTGAACTTCATCTTTTTCTTG
TTTGTGAGCAAGTTTTATGTGTATAAAGCTGAAGTCTCAGATTCATTGGCTGTGCTAAGG
CAAGAATTGGAGATTGGATCAAAACATAGGGTGACTAATAGCCAAGAAGCTTCAACCAAC
ACACAAATTTGA

Peptide Sequence

PEP ID

XP_016453540.1
PEP Infomation

PREDICTED: protein NRT1/ PTR FAMILY 5.2-like [Nicotiana tabacum]
Sequence

MAACQVDENGYDDGYTKDGTVDLKGNPVLRSKRGGWKACSFIVVYEVFERMAYYGISSNL
VIYLTEKLHQGTVKSSNNVTNWVGTIWMTPILGAYFADAFLGRYWTFLIASAIYLLGMSL
LTLAVSIHGLKPPPCASPTAANCKKASTLQLAVFFGALYTLAVGTGGTKPNISTIGADQF
DEFHPKEKSQKLSFFNWWMFSIFLGTLFANTVLVYIQDNVGWTLGYGLPTVGLGISIMIF
LAGSSFYRHKKPRGSPFTRMAKVIIAALRKWKVTVPTDPKELYELDLGEYTKNGKVRIDS
TPTLRFLNKACVKTDTNDPWMLCSVTQVEETKQMLRMIPILIATFIPSTMIAQINTLFVK
QGTTLKRNIGNFSIPPASLGAFVTISLLVSVVLYDRFFMKIAKRLTKNPRGINILQRMGI
GMAFHILIMLVASFVERHRLSVAKDNGLVENGKQVPLSILILLPQFILMGTADAFLEVAK
IEFFYDQAPEGMKSLGTSYSMTSLGVGNFISSFLLSTVSDITKKHGNHRGWILNNLNASH
LDYYYALFAVLNLLNFIFFLFVSKFYVYKAEVSDSLAVLRQELEIGSKHRVTNSQEASTN
TQI

Transcript Sequence

Gene sequence data has not been registered.